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hetparse |
This package is still being developed.
Please ignore this program until further details can be documented.
All further queries should go to Jon Ison. (Jon Ison)
% hetparse
EMBOSS An error in ajacd.c at line 1531: acdfile '/packages/emboss_dev/gwilliam/emboss/emboss/emboss/acd/hetparse.acd' not opened |
EMBOSS An error in ajacd.c at line 1531: acdfile '/packages/emboss_dev/gwilliam/emboss/emboss/emboss/acd/hetparse.acd' not opened
| Program name | Description |
|---|---|
| aaindexextract | Extract data from AAINDEX |
| cutgextract | Extract data from CUTG |
| domainer | Reads protein coordinate files and writes domain coordinate files |
| funky | Reads clean coordinate files and writes file of protein-heterogen contact data |
| nrscope | Converts redundant EMBL-format SCOP file to non-redundant one |
| pdbparse | Parses pdb files and writes cleaned-up protein coordinate files |
| pdbtosp | Convert raw swissprot:pdb equivalence file to embl-like format |
| printsextract | Extract data from PRINTS |
| prosextract | Builds the PROSITE motif database for patmatmotifs to search |
| rebaseextract | Extract data from REBASE |
| scope | Convert raw scop classification file to embl-like format |
| scopnr | Removes redundant domains from a scop classification file |
| scopparse | Converts raw scop classification files to a file in embl-like format |
| scopseqs | Adds pdb and swissprot sequence records to a scop classification file |
| seqnr | Reads a scop families file and a scop ambiguities file and writes (i) a non-redundant scop families file and (ii) a scop validation file |
| tfextract | Extract data from TRANSFAC |